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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886241.1_cds_XP_016440343.1_35814
CDS Infomation

[gene=LOC107766123] [db_xref=GeneID:107766123] [protein=APO protein 1, chloroplastic-like] [protein_id=XP_016440343.1] [location=complement(join(51479..52310,52421..52785,53991..54055,54327..54405))] [gbkey=CDS]
Sequence

ATGCTCCAGAATTTTCCAGCTGTGACATATAGTCCATGGCAGCCATCTCAAAATGATTCC
TACTTCAAGTCTTTGCCATGTGCTTCTCCCGGCATGGTTGTATATAAGAAGTCGCAACAA
CGGCCTTATTTGCTTACTCTAAAGTTTGATCGTAGATATCATGCTACTGGTCCAAGAAGA
CAAGCAACCATTTTTTGTACTGATAGGAGGCATCCCCAAGGTCGAAACTCTAAGAAACGT
GAAGCTGTGCAGCAGAATGTGGATCTTCCCCCAGTCCTGCCCAAGAAAAAGAAGAAGCCC
TATCCCATGCCTCTCAAGAAAATTCAGCAGGCTTCTAGGGCTGATAAGAAGCTAGCAGAA
ATGGGAATAGAAAAGAAGCTTGAACCCCCTAAAAATGGTTTGCTTGTGCCTGACTTAATT
CCGGTGGCTTATGAAGTATTAGATGCTTGGAAACTTTTGATTAAAGGACTTGCACAGCTT
CTCCACTATGTTCCTGTCCATGCTTGTAGTGAATGCTCAGAAATCCATGTTGCTCAAAGT
GGTCACGACATTCAGGATTGCCTTGGCACGACCAACAGTAGTCGCAGAAGCTTCCACTCA
TGGGTGAAGGGTTCGATTAATGATGTGCTAATTCCTATCGAGTCTTACCATATGTATGAT
CCTTTTGGCACACGCATTAAGCATGAGACACGATTCAACTATGACAGAATTCCTGCAGTT
GTAGAACTTTGCATCCAAGCTGGCGTGGATCTGCCGGGATATCCTTCGCGGAGAAGGACT
AAACCCATCAGAATGATAGGAAAAAAAGTGATCGACATAGGTGGATTAGTTGAGGAGCAT
AGACCCTCTGTAGACACAAGTTCAGTAATTATGGACCTTGACACCCATCGGTCTTTTGAA
CGGTTTGCTCCACCATTGGAGTCAGAGGTGCCACGTATTGCCCAGGAGACAATTGACGCG
TATGAGAAAGTGAAATGGGGGGTGACTAGGTTGATGAAGAAGTACACTGTCAAAGCTTGC
GGGTACTGTTCAGAGGTCCATGTGGGGCCGTGCGGTCACAATGCTAAGCTCTGTGGCGAA
TTTAAACACCAATGGAGGGATGGAAAACATGGCTGGCAAGATGCAACAGTGGATGAGGTA
TTTCCCCCAAATTATGTGTGGCATGTTCGAGATCCAAAAGGAACCCCTTTGAGGAGTGCA
CTAAAGAGGTTCTATGGGAAGGCTCCAGCTGTGGTTGAAGTTTGTATGCAGGCTGGTGCT
CAAATACCTCACAAGTATAAGCCTATGATGAGGCTAGACATTGTGCTTCCGGAGAGTGAA
GAGAGTCGCCTAGCCGTGTAA

Peptide Sequence

PEP ID

XP_016440343.1
PEP Infomation

PREDICTED: APO protein 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MLQNFPAVTYSPWQPSQNDSYFKSLPCASPGMVVYKKSQQRPYLLTLKFDRRYHATGPRR
QATIFCTDRRHPQGRNSKKREAVQQNVDLPPVLPKKKKKPYPMPLKKIQQASRADKKLAE
MGIEKKLEPPKNGLLVPDLIPVAYEVLDAWKLLIKGLAQLLHYVPVHACSECSEIHVAQS
GHDIQDCLGTTNSSRRSFHSWVKGSINDVLIPIESYHMYDPFGTRIKHETRFNYDRIPAV
VELCIQAGVDLPGYPSRRRTKPIRMIGKKVIDIGGLVEEHRPSVDTSSVIMDLDTHRSFE
RFAPPLESEVPRIAQETIDAYEKVKWGVTRLMKKYTVKACGYCSEVHVGPCGHNAKLCGE
FKHQWRDGKHGWQDATVDEVFPPNYVWHVRDPKGTPLRSALKRFYGKAPAVVEVCMQAGA
QIPHKYKPMMRLDIVLPESEESRLAV

Transcript Sequence

Gene sequence data has not been registered.